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The severe acute respiratory syndrome-coronavirus replicative protein nsp9 is a single-stranded RNA-binding subunit unique in the RNA virus world

Identifieur interne : 001430 ( Pmc/Checkpoint ); précédent : 001429; suivant : 001431

The severe acute respiratory syndrome-coronavirus replicative protein nsp9 is a single-stranded RNA-binding subunit unique in the RNA virus world

Auteurs : Marie-Pierre Egloff [France] ; François Ferron [France] ; Valérie Campanacci [France] ; Sonia Longhi [France] ; Corinne Rancurel [France] ; Hélène Dutartre [France] ; Eric J. Snijder [Pays-Bas] ; Alexander E. Gorbalenya [Pays-Bas] ; Christian Cambillau [France] ; Bruno Canard [France]

Source :

RBID : PMC:374323

Abstract

The recently identified etiological agent of the severe acute respiratory syndrome (SARS) belongs to Coronaviridae (CoV), a family of viruses replicating by a poorly understood mechanism. Here, we report the crystal structure at 2.7-Å resolution of nsp9, a hitherto uncharacterized subunit of the SARS-CoV replicative polyproteins. We show that SARS-CoV nsp9 is a single-stranded RNA-binding protein displaying a previously unreported, oligosaccharide/oligonucleotide fold-like fold. The presence of this type of protein has not been detected in the replicative complexes of RNA viruses, and its presence may reflect the unique and complex CoV viral replication/transcription machinery.


Url:
DOI: 10.1073/pnas.0307877101
PubMed: 15007178
PubMed Central: 374323


Affiliations:


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PMC:374323

Le document en format XML

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<p>The recently identified etiological agent of the severe acute respiratory syndrome (SARS) belongs to
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(CoV), a family of viruses replicating by a poorly understood mechanism. Here, we report the crystal structure at 2.7-Å resolution of nsp9, a hitherto uncharacterized subunit of the SARS-CoV replicative polyproteins. We show that SARS-CoV nsp9 is a single-stranded RNA-binding protein displaying a previously unreported, oligosaccharide/oligonucleotide fold-like fold. The presence of this type of protein has not been detected in the replicative complexes of RNA viruses, and its presence may reflect the unique and complex CoV viral replication/transcription machinery.</p>
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<article-id pub-id-type="doi">10.1073/pnas.0307877101</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Biological Sciences</subject>
<subj-group>
<subject>Biochemistry</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>The severe acute respiratory syndrome-coronavirus replicative protein nsp9 is a single-stranded RNA-binding subunit unique in the RNA virus world</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Egloff</surname>
<given-names>Marie-Pierre</given-names>
</name>
<xref ref-type="aff" rid="N0x8a583c0.0x97d42d8">*</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Ferron</surname>
<given-names>François</given-names>
</name>
<xref ref-type="aff" rid="N0x8a583c0.0x97d42d8">*</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Campanacci</surname>
<given-names>Valérie</given-names>
</name>
<xref ref-type="aff" rid="N0x8a583c0.0x97d42d8">*</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Longhi</surname>
<given-names>Sonia</given-names>
</name>
<xref ref-type="aff" rid="N0x8a583c0.0x97d42d8">*</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Rancurel</surname>
<given-names>Corinne</given-names>
</name>
<xref ref-type="aff" rid="N0x8a583c0.0x97d42d8">*</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Dutartre</surname>
<given-names>Hélène</given-names>
</name>
<xref ref-type="aff" rid="N0x8a583c0.0x97d42d8">*</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Snijder</surname>
<given-names>Eric J.</given-names>
</name>
<xref ref-type="aff" rid="N0x8a583c0.0x97d42d8"></xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Gorbalenya</surname>
<given-names>Alexander E.</given-names>
</name>
<xref ref-type="aff" rid="N0x8a583c0.0x97d42d8"></xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Cambillau</surname>
<given-names>Christian</given-names>
</name>
<xref ref-type="aff" rid="N0x8a583c0.0x97d42d8">*</xref>
<xref ref-type="corresp" rid="cor1"></xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Canard</surname>
<given-names>Bruno</given-names>
</name>
<xref ref-type="aff" rid="N0x8a583c0.0x97d42d8">*</xref>
<xref ref-type="corresp" rid="cor1"></xref>
</contrib>
</contrib-group>
<aff id="N0x8a583c0.0x97d42d8">
<label>*</label>
Architecture et Fonction des Macromolécules Biologiques, Unité Mixte de Recherche 6098 Centre National de la Recherche Scientifique and Universités Aix-Marseille I et II, 31 Chemin Joseph Aiguier, 13402 Marseille Cedex 20, France; and
<label></label>
Molecular Virology Laboratory, Department of Medical Microbiology, Center of Infectious Diseases, Leiden University Medical Center, P.O. Box 9600, 2300 RC, Leiden, The Netherlands</aff>
<author-notes>
<fn id="cor1">
<label></label>
<p> To whom correspondence should be addressed. E-mail:
<email>cambillau@afmb.cnrs-mrs.fr</email>
or
<email>bruno@afmb.cnrs-mrs.fr</email>
. </p>
</fn>
<fn>
<p>Edited by Stephen C. Harrison, Harvard Medical School, Boston, MA, and approved January 28, 2004</p>
</fn>
</author-notes>
<pub-date pub-type="ppub">
<day>16</day>
<month>3</month>
<year>2004</year>
</pub-date>
<pub-date pub-type="epub">
<day>8</day>
<month>3</month>
<year>2004</year>
</pub-date>
<volume>101</volume>
<issue>11</issue>
<fpage>3792</fpage>
<lpage>3796</lpage>
<history>
<date date-type="received">
<day>26</day>
<month>11</month>
<year>2003</year>
</date>
</history>
<copyright-statement>Copyright © 2004, The National Academy of Sciences</copyright-statement>
<copyright-year>2004</copyright-year>
<abstract>
<p>The recently identified etiological agent of the severe acute respiratory syndrome (SARS) belongs to
<italic>Coronaviridae</italic>
(CoV), a family of viruses replicating by a poorly understood mechanism. Here, we report the crystal structure at 2.7-Å resolution of nsp9, a hitherto uncharacterized subunit of the SARS-CoV replicative polyproteins. We show that SARS-CoV nsp9 is a single-stranded RNA-binding protein displaying a previously unreported, oligosaccharide/oligonucleotide fold-like fold. The presence of this type of protein has not been detected in the replicative complexes of RNA viruses, and its presence may reflect the unique and complex CoV viral replication/transcription machinery.</p>
</abstract>
</article-meta>
<notes>
<fn-group>
<fn>
<p>This paper was submitted directly (Track II) to the PNAS office.</p>
</fn>
<fn>
<p>Abbreviations: SARS, severe acute respiratory syndrome; CoV, coronavirus; ss, single-stranded; SSB, ssDNA-binding protein; OB, oligosaccharide/oligonucleotide-binding;
<italic>K</italic>
<sub>Dapp</sub>
, dissociation equilibrium constant; NCBI, National Center for Biotechnology Information.</p>
</fn>
<fn>
<p>Data deposition: The atomic coordinates and structure factors have been deposited in the Protein Data Bank,
<ext-link ext-link-type="uri" xlink:href="www.pdb.org">www.pdb.org</ext-link>
(PDB ID code 1QZ8).</p>
</fn>
</fn-group>
</notes>
</front>
</pmc>
<affiliations>
<list>
<country>
<li>France</li>
<li>Pays-Bas</li>
</country>
<region>
<li>Hollande-Méridionale</li>
<li>Provence-Alpes-Côte d'Azur</li>
</region>
<settlement>
<li>Leyde</li>
<li>Marseille</li>
</settlement>
</list>
<tree>
<country name="France">
<region name="Provence-Alpes-Côte d'Azur">
<name sortKey="Egloff, Marie Pierre" sort="Egloff, Marie Pierre" uniqKey="Egloff M" first="Marie-Pierre" last="Egloff">Marie-Pierre Egloff</name>
</region>
<name sortKey="Cambillau, Christian" sort="Cambillau, Christian" uniqKey="Cambillau C" first="Christian" last="Cambillau">Christian Cambillau</name>
<name sortKey="Campanacci, Valerie" sort="Campanacci, Valerie" uniqKey="Campanacci V" first="Valérie" last="Campanacci">Valérie Campanacci</name>
<name sortKey="Canard, Bruno" sort="Canard, Bruno" uniqKey="Canard B" first="Bruno" last="Canard">Bruno Canard</name>
<name sortKey="Dutartre, Helene" sort="Dutartre, Helene" uniqKey="Dutartre H" first="Hélène" last="Dutartre">Hélène Dutartre</name>
<name sortKey="Ferron, Francois" sort="Ferron, Francois" uniqKey="Ferron F" first="François" last="Ferron">François Ferron</name>
<name sortKey="Longhi, Sonia" sort="Longhi, Sonia" uniqKey="Longhi S" first="Sonia" last="Longhi">Sonia Longhi</name>
<name sortKey="Rancurel, Corinne" sort="Rancurel, Corinne" uniqKey="Rancurel C" first="Corinne" last="Rancurel">Corinne Rancurel</name>
</country>
<country name="Pays-Bas">
<region name="Hollande-Méridionale">
<name sortKey="Snijder, Eric J" sort="Snijder, Eric J" uniqKey="Snijder E" first="Eric J." last="Snijder">Eric J. Snijder</name>
</region>
<name sortKey="Gorbalenya, Alexander E" sort="Gorbalenya, Alexander E" uniqKey="Gorbalenya A" first="Alexander E." last="Gorbalenya">Alexander E. Gorbalenya</name>
</country>
</tree>
</affiliations>
</record>

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